ENSGALG00000015944


Gallus gallus

Features
Gene ID: ENSGALG00000015944
  
Biological name :RIMS1
  
Synonyms : regulating synaptic membrane exocytosis 1 / RIMS1
  
Possible biological names infered from orthology : Q86UR5
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 82215093
Gene end: 82512310
  
Corresponding Affymetrix probe sets: GgaAffx.10163.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045924
Ensembl peptide - ENSGALP00000025647
NCBI entrez gene - 421867     See in Manteia.
RefSeq - XM_419884
RefSeq - XM_015284790
RefSeq - XM_015284792
RefSeq - XM_004940437
RefSeq - XM_004940439
RefSeq - XM_015284765
RefSeq - XM_015284766
RefSeq - XM_015284767
RefSeq - XM_015284768
RefSeq - XM_015284769
RefSeq - XM_015284770
RefSeq - XM_015284771
RefSeq - XM_015284772
RefSeq - XM_015284773
RefSeq - XM_015284774
RefSeq - XM_015284775
RefSeq - XM_015284776
RefSeq - XM_015284777
RefSeq - XM_015284778
RefSeq - XM_015284779
RefSeq - XM_015284780
RefSeq - XM_015284781
RefSeq - XM_015284782
RefSeq - XM_015284784
RefSeq - XM_015284785
RefSeq - XM_015284786
RefSeq - XM_015284787
RefSeq - XM_015284789
swissprot - F1P5P9
swissprot - A0A1D5NZV4
Ensembl - ENSGALG00000015944
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rims1aENSDARG00000074680Danio rerio
 rims1bENSDARG00000078902Danio rerio
 RIMS1ENSG00000079841Homo sapiens
 Rims1ENSMUSG00000041670Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RIMS2 / regulating synaptic membrane exocytosis 2 / Q9EQZ7* / Q9UQ26* / Regulating synaptic membrane exocytosis protein 2 *ENSGALG0000004025653
RIMS3 / regulating synaptic membrane exocytosis 3 / Q80U57* / Q9UJD0*ENSGALG0000000317414
RIMS4 / regulating synaptic membrane exocytosis 4 / P60191* / Q9H426* / Regulating synaptic membrane exocytosis protein 4 *ENSGALG0000000414611


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR001478  PDZ domain
 IPR010911  Rab-binding domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017455  Zinc finger, FYVE-related
 IPR030630  Regulating synaptic membrane exocytosis protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0042391 regulation of membrane potential IBA
 biological_processGO:0048791 calcium ion-regulated exocytosis of neurotransmitter IBA
 biological_processGO:0065003 protein-containing complex assembly IEA
 biological_processGO:1903861 positive regulation of dendrite extension IEA
 biological_processGO:2000300 regulation of synaptic vesicle exocytosis IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0048786 presynaptic active zone IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA
 molecular_functionGO:0044325 ion channel binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Norepinephrine Neurotransmitter Release Cycle
Glutamate Neurotransmitter Release Cycle
Acetylcholine Neurotransmitter Release Cycle
GABA synthesis, release, reuptake and degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000000217 PPFIA4 / PTPRF interacting protein alpha 4 / O75335* / protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4*  / complex






 

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