ENSGALG00000016042


Gallus gallus

Features
Gene ID: ENSGALG00000016042
  
Biological name :CHAF1B
  
Synonyms : CHAF1B / chromatin assembly factor 1 subunit B
  
Possible biological names infered from orthology : Q13112 / Q9D0N7
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 106660194
Gene end: 106677742
  
Corresponding Affymetrix probe sets: Gga.8862.1.S1_s_at (Chicken Array)   GgaAffx.10225.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000025797
NCBI entrez gene - 418514     See in Manteia.
RefSeq - XM_015299481
RefSeq - NM_001008677
RefSeq - XM_015299470
RefSeq - XM_015299476
RefSeq Peptide - NP_001008677
swissprot - F1P2D7
Ensembl - ENSGALG00000016042
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chaf1bENSDARG00000056473Danio rerio
 CHAF1BENSG00000159259Homo sapiens
 Chaf1bENSMUSG00000022945Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001632  G-protein, beta subunit
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR029129  Chromatin assembly factor 1 subunit B, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006335 DNA replication-dependent nucleosome assembly IEA
 biological_processGO:0031497 chromatin assembly IEA
 cellular_componentGO:0000790 nuclear chromatin IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0033186 CAF-1 complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr