ENSMUSG00000022945


Mus musculus

Features
Gene ID: ENSMUSG00000022945
  
Biological name :Chaf1b
  
Synonyms : Chaf1b / Chromatin assembly factor 1 subunit B / Q9D0N7
  
Possible biological names infered from orthology : Q13112
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: C4
Gene start: 93883901
Gene end: 93906115
  
Corresponding Affymetrix probe sets: 10437040 (MoGene1.0st)   1423877_at (Mouse Genome 430 2.0 Array)   1431275_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000113420
Ensembl peptide - ENSMUSP00000121034
Ensembl peptide - ENSMUSP00000113684
Ensembl peptide - ENSMUSP00000023666
NCBI entrez gene - 110749     See in Manteia.
MGI - MGI:1314881
RefSeq - NM_028083
RefSeq - XM_006522847
RefSeq Peptide - NP_082359
swissprot - D3Z616
swissprot - Q9D0N7
swissprot - D3YTP6
Ensembl - ENSMUSG00000022945
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 chaf1bENSDARG00000056473Danio rerio
 CHAF1BENSGALG00000016042Gallus gallus
 CHAF1BENSG00000159259Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001632  G-protein, beta subunit
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR029129  Chromatin assembly factor 1 subunit B, C-terminal domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006334 nucleosome assembly IBA
 biological_processGO:0006335 DNA replication-dependent nucleosome assembly ISO
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0031497 chromatin assembly ISS
 cellular_componentGO:0000790 nuclear chromatin ISO
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0032991 protein-containing complex IEA
 cellular_componentGO:0033186 CAF-1 complex IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0042393 histone binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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