ENSGALG00000016578


Gallus gallus

Features
Gene ID: ENSGALG00000016578
  
Biological name :TRAPPC2
  
Synonyms : TRAPPC2
  
Possible biological names infered from orthology : 0610009B22Rik / P0DI81 / P0DI82 / Q9CQP2 / RIKEN cDNA 0610009B22 gene / trafficking protein particle complex 2 / trafficking protein particle complex 2B / Trafficking protein particle complex subunit 2 / TRAPPC2B
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 122963819
Gene end: 122969710
  
Corresponding Affymetrix probe sets: GgaAffx.12143.1.S1_at (Chicken Array)   GgaAffx.12143.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026710
Ensembl peptide - ENSGALP00000049517
NCBI entrez gene - 418634     See in Manteia.
RefSeq - NM_001006263
RefSeq - XM_015273553
RefSeq Peptide - NP_001006263
swissprot - A0A1I7Q427
swissprot - A0A1D5P9V9
Ensembl - ENSGALG00000016578
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q08CN0ENSDARG00000097660Danio rerio
 P0DI81ENSG00000196459Homo sapiens
 P0DI82ENSG00000256060Homo sapiens
 0610009B22RikENSMUSG00000007777Mus musculus
 Q9CQP2ENSMUSG00000079317Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006722  Trafficking protein particle complex subunit 2
 IPR011012  Longin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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