ENSGALG00000016936


Gallus gallus

Features
Gene ID: ENSGALG00000016936
  
Biological name :TDRD3
  
Synonyms : TDRD3 / tudor domain-containing protein 3
  
Possible biological names infered from orthology : Q91W18 / Q9H7E2 / tudor domain containing 3
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 162193513
Gene end: 162295112
  
Corresponding Affymetrix probe sets: Gga.9367.1.S1_at (Chicken Array)   Gga.9367.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027325
Ensembl peptide - ENSGALP00000062469
NCBI entrez gene - 418823     See in Manteia.
RefSeq - NM_001030822
RefSeq - XM_015275390
RefSeq Peptide - NP_001025993
swissprot - E1BXW9
swissprot - A0A1L1RUG9
Ensembl - ENSGALG00000016936
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tdrd3ENSDARG00000025421Danio rerio
 TDRD3ENSG00000083544Homo sapiens
 Tdrd3ENSMUSG00000022019Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RMI1 / recQ-mediated genome instability protein 1 / Q9D4G9* / Q9H9A7* / RecQ mediated genome instability 1*ENSGALG0000001259215


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR009060  UBA-like superfamily
 IPR010304  Survival motor neuron
 IPR013894  RecQ mediated genome instability protein, N-terminal
 IPR015940  Ubiquitin-associated domain
 IPR033472  RecQ mediated genome instability protein, DUF1767


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0035145 exon-exon junction complex IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0035064 methylated histone binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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