ENSGALG00000017296


Gallus gallus

Features
Gene ID: ENSGALG00000017296
  
Biological name :KLHL42
  
Synonyms : kelch like family member 42 / KLHL42
  
Possible biological names infered from orthology : Kelch-like protein 42 / Q8BFQ9 / Q9P2K6
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 72420206
Gene end: 72430748
  
Corresponding Affymetrix probe sets: GgaAffx.11089.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000027898
NCBI entrez gene - 419046     See in Manteia.
RefSeq - XM_417237
swissprot - F1P5X6
Ensembl - ENSGALG00000017296
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 klhl42ENSDARG00000006011Danio rerio
 KLHL42ENSG00000087448Homo sapiens
 Klhl42ENSMUSG00000040102Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KBTBD11 / kelch repeat and BTB domain containing 11 / O94819* / Q8BNW9* / Kelch repeat and BTB domain-containing protein 11 *ENSGALG0000002288717
KBTBD13 / kelch repeat and BTB domain containing 13 / C9JR72* / Q8C828* / Kelch repeat and BTB domain-containing protein 13 *ENSGALG0000000733514


Protein motifs (from Interpro)
Interpro ID Name
 IPR006652  Kelch repeat type 1
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR015915  Kelch-type beta propeller


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IEA
 biological_processGO:0032886 regulation of microtubule-based process IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEA
 cellular_componentGO:0031463 Cul3-RING ubiquitin ligase complex IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr