ENSGALG00000021117


Gallus gallus

Features
Gene ID: ENSGALG00000021117
  
Biological name :RNF7
  
Synonyms : RING-box protein 2 / RNF7
  
Possible biological names infered from orthology : Gm7075 / Q9UBF6 / Q9WTZ1 / ring finger protein 7
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 10262779
Gene end: 10269197
  
Corresponding Affymetrix probe sets: Gga.6330.1.S1_at (Chicken Array)   Gga.6330.2.S1_s_at (Chicken Array)   Gga.6330.3.A1_at (Chicken Array)   GgaAffx.12637.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000033343
NCBI entrez gene - 424781     See in Manteia.
RefSeq - NM_001031307
RefSeq - XM_015276886
RefSeq Peptide - NP_001026478
swissprot - F1NSF0
Ensembl - ENSGALG00000021117
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf7ENSDARG00000055524Danio rerio
 RNF7ENSG00000114125Homo sapiens
 Gm7075ENSMUSG00000048185Mus musculus
 Rnf7ENSMUSG00000051234Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBX1 / ring-box 1 / P62877* / P62878* / E3 ubiquitin-protein ligase RBX1 E3 ubiquitin-protein ligase RBX1, N-terminally processed*ENSGALG0000001199342


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR024766  Zinc finger, RING-H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IBA
 biological_processGO:0045116 protein neddylation IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0031462 Cul2-RING ubiquitin ligase complex IBA
 cellular_componentGO:0031463 Cul3-RING ubiquitin ligase complex IBA
 cellular_componentGO:0031466 Cul5-RING ubiquitin ligase complex IEA
 cellular_componentGO:0031467 Cul7-RING ubiquitin ligase complex IBA
 cellular_componentGO:0043224 nuclear SCF ubiquitin ligase complex IBA
 cellular_componentGO:0080008 Cul4-RING E3 ubiquitin ligase complex IBA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0019788 NEDD8 transferase activity IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA
 molecular_functionGO:0097602 cullin family protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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