ENSGALG00000021683


Gallus gallus

Features
Gene ID: ENSGALG00000021683
  
Biological name :RER1
  
Synonyms : Protein RER1 / Q5ZHM5 / RER1
  
Possible biological names infered from orthology : O15258 / Q9CQU3 / retention in endoplasmic reticulum sorting receptor 1
  
Species: Gallus gallus
  
Chr. number: 21
Strand: -1
Band:
Gene start: 1542546
Gene end: 1549777
  
Corresponding Affymetrix probe sets: Gga.1255.2.S1_s_at (Chicken Array)   GgaAffx.13212.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043636
Ensembl peptide - ENSGALP00000060998
Ensembl peptide - ENSGALP00000039623
NCBI entrez gene - 419397     See in Manteia.
RefSeq - NM_001006300
RefSeq - XM_015296855
RefSeq Peptide - NP_001006300
swissprot - A0A1L1RQD1
swissprot - Q5ZHM5
Ensembl - ENSGALG00000021683
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rer1ENSDARG00000012747Danio rerio
 RER1ENSG00000157916Homo sapiens
 Rer1ENSMUSG00000029048Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004932  Retrieval of early ER protein Rer1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER IBA
 biological_processGO:0007528 neuromuscular junction development IEA
 biological_processGO:0071340 skeletal muscle acetylcholine-gated channel clustering IEA
 biological_processGO:1903078 positive regulation of protein localization to plasma membrane IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane IEA
 molecular_functionGO:0033130 acetylcholine receptor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr