ENSGALG00000023626


Gallus gallus

Features
Gene ID: ENSGALG00000023626
  
Biological name :NTN1
  
Synonyms : netrin-1 precursor / NTN1
  
Possible biological names infered from orthology : netrin 1 / O09118 / O95631
  
Species: Gallus gallus
  
Chr. number: 18
Strand: 1
Band:
Gene start: 2084105
Gene end: 2131749
  
Corresponding Affymetrix probe sets: Gga.794.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000038541
NCBI entrez gene - 396389     See in Manteia.
RefSeq - NM_205419
RefSeq Peptide - NP_990750
swissprot - A0A1I7Q444
Ensembl - ENSGALG00000023626
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ntn1aENSDARG00000105112Danio rerio
 ntn1bENSDARG00000022531Danio rerio
 NTN1ENSG00000065320Homo sapiens
 Ntn1ENSMUSG00000020902Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NTN3 / netrin-3 precursor / O00634* / Q3UUG6* / Q9R1A3* / Tbc1d24* / netrin 3*ENSGALG0000002907261
NTNG1 / netrin G1 / Q8R4G0* / Q9Y2I2*ENSGALG0000003112222
NTNG2 / netrin G2 / Q8R4F1* / Q96CW9*ENSGALG0000000367721
USH2A* / O75445* / Q2QI47* / usherin*ENSGALG0000000965219
MEGF9* / Q8BH27* / Q9H1U4* / multiple EGF like domains 9* / Multiple epidermal growth factor-like domains protein 9 *ENSGALG0000003345510
USH2A* / O75445* / Q2QI47* / usherin*ENSGALG000000455631
USH2A* / O75445* / Q2QI47* / usherin*ENSGALG000000444190


Protein motifs (from Interpro)
Interpro ID Name
 IPR001134  Netrin domain
 IPR002049  Laminin EGF domain
 IPR008211  Laminin, N-terminal
 IPR008979  Galactose-binding-like domain superfamily
 IPR008993  Tissue inhibitor of metalloproteinases-like, OB-fold
 IPR018933  Netrin module, non-TIMP type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0007097 nuclear migration IEA
 biological_processGO:0007409 axonogenesis IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0030334 regulation of cell migration IEA
 biological_processGO:0030517 negative regulation of axon extension IEA
 biological_processGO:0030879 mammary gland development IEA
 biological_processGO:0033564 anterior/posterior axon guidance IEA
 biological_processGO:0042472 inner ear morphogenesis IEA
 biological_processGO:0045773 positive regulation of axon extension IEA
 biological_processGO:0060603 mammary gland duct morphogenesis IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA


Pathways (from Reactome)
Pathway description
DCC mediated attractive signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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