ENSGALG00000026796


Gallus gallus

Features
Gene ID: ENSGALG00000026796
  
Biological name :SNAPIN
  
Synonyms : SNAP associated protein / SNAPIN
  
Possible biological names infered from orthology : O95295 / Q9Z266 / SNARE-associated protein Snapin
  
Species: Gallus gallus
  
Chr. number: 25
Strand: -1
Band:
Gene start: 1705503
Gene end: 1707626
  
Corresponding Affymetrix probe sets: Gga.16321.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000041040
Ensembl peptide - ENSGALP00000050179
Ensembl peptide - ENSGALP00000049396
NCBI entrez gene - 100858163     See in Manteia.
RefSeq - XM_003642627
swissprot - A0A1D5PBP9
swissprot - A0A1D5P9J2
swissprot - R4GG77
Ensembl - ENSGALG00000026796
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snapinENSDARG00000062382Danio rerio
 O95295ENSG00000143553Homo sapiens
 Q9Z266ENSMUSG00000001018Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR017246  Snapin
 IPR028119  Snapin/Pallidin/Snn1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0007040 lysosome organization IEA
 biological_processGO:0007042 lysosomal lumen acidification IEA
 biological_processGO:0007268 chemical synaptic transmission IEA
 biological_processGO:0008089 anterograde axonal transport IEA
 biological_processGO:0008090 retrograde axonal transport IEA
 biological_processGO:0008333 endosome to lysosome transport IEA
 biological_processGO:0010977 negative regulation of neuron projection development IEA
 biological_processGO:0016079 synaptic vesicle exocytosis IEA
 biological_processGO:0016188 synaptic vesicle maturation IEA
 biological_processGO:0031629 synaptic vesicle fusion to presynaptic active zone membrane IEA
 biological_processGO:0032418 lysosome localization IEA
 biological_processGO:0034629 cellular protein-containing complex localization IEA
 biological_processGO:0043393 regulation of protein binding IEA
 biological_processGO:0048489 synaptic vesicle transport IEA
 biological_processGO:0048490 anterograde synaptic vesicle transport IEA
 biological_processGO:0051604 protein maturation IEA
 biological_processGO:0072553 terminal button organization IEA
 biological_processGO:0097352 autophagosome maturation IEA
 biological_processGO:1902774 late endosome to lysosome transport IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IEA
 cellular_componentGO:0031083 BLOC-1 complex IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0099078 BORC complex IEA
 molecular_functionGO:0000149 SNARE binding IEA


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr