ENSMUSG00000001018


Mus musculus

Features
Gene ID: ENSMUSG00000001018
  
Biological name :Snapin
  
Synonyms : Q9Z266 / Snapin / SNARE-associated protein Snapin
  
Possible biological names infered from orthology : O95295 / SNAP associated protein
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: F1
Gene start: 90488026
Gene end: 90491033
  
Corresponding Affymetrix probe sets: 10499839 (MoGene1.0st)   10338832 (MoGene1.0st)   10339070 (MoGene1.0st)   10339708 (MoGene1.0st)   10340534 (MoGene1.0st)   10342064 (MoGene1.0st)   10342209 (MoGene1.0st)   10342525 (MoGene1.0st)   10343169 (MoGene1.0st)   10343253 (MoGene1.0st)   10343812 (MoGene1.0st)   1415756_a_at (Mouse Genome 430 2.0 Array)   1426578_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000122090
Ensembl peptide - ENSMUSP00000139160
Ensembl peptide - ENSMUSP00000139315
NCBI entrez gene - 20615     See in Manteia.
MGI - MGI:1333745
RefSeq - NM_133854
RefSeq Peptide - NP_598615
swissprot - Q9Z266
swissprot - V9GXI0
swissprot - V9GXT7
Ensembl - ENSMUSG00000001018
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snapinENSDARG00000062382Danio rerio
 SNAPINENSGALG00000026796Gallus gallus
 O95295ENSG00000143553Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR017246  Snapin
 IPR028119  Snapin/Pallidin/Snn1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0007040 lysosome organization IMP
 biological_processGO:0007042 lysosomal lumen acidification IMP
 biological_processGO:0007268 chemical synaptic transmission IMP
 biological_processGO:0008089 anterograde axonal transport IMP
 biological_processGO:0008090 retrograde axonal transport IMP
 biological_processGO:0008333 endosome to lysosome transport IEA
 biological_processGO:0010977 negative regulation of neuron projection development IGI
 biological_processGO:0016079 synaptic vesicle exocytosis IEA
 biological_processGO:0016188 synaptic vesicle maturation IMP
 biological_processGO:0017156 calcium ion regulated exocytosis TAS
 biological_processGO:0031175 neuron projection development NAS
 biological_processGO:0031629 synaptic vesicle fusion to presynaptic active zone membrane IMP
 biological_processGO:0032418 lysosome localization IEA
 biological_processGO:0034629 cellular protein-containing complex localization IMP
 biological_processGO:0043393 regulation of protein binding IEA
 biological_processGO:0048489 synaptic vesicle transport IEA
 biological_processGO:0048490 anterograde synaptic vesicle transport IMP
 biological_processGO:0051604 protein maturation IMP
 biological_processGO:0072553 terminal button organization IMP
 biological_processGO:0097352 autophagosome maturation IMP
 biological_processGO:1902774 late endosome to lysosome transport IMP
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0008021 synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030141 secretory granule IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IEA
 cellular_componentGO:0031083 BLOC-1 complex ISO
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0045202 synapse ISO
 cellular_componentGO:0048471 perinuclear region of cytoplasm ISS
 cellular_componentGO:0099078 BORC complex IEA
 cellular_componentGO:1904115 axon cytoplasm IEA
 molecular_functionGO:0000149 SNARE binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001739 abnormal adrenal secretion "altered ability of the surparenal gland to secrete hormones " [hdene:Howard Dene , Mouse Genome Informatics Curator]
Show

Allelic Composition: Catf/Catf
Genetic Background: Not Specified

 MP:0001914 hemorrhage "loss of blood from the vascular compartment to the exterior or into nonvascular body space as a result of rupture or severance of the blood vessels" [Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Gtpbp2tm1b(KOMP)Mbp/Gtpbp2+
Genetic Background: C57BL/6N-Gtpbp2tm1b(KOMP)Mbp/Ucd

 MP:0004768 abnormal axonal transport "any functional anomaly of the directed movement of organelles or vesicles along microtubules in nerve cell axons" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Crb2tm1.1Wij/Crb2tm1.1Wij,Tg(Crx-cre)1Tfur/0
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0005621 abnormal cell physiology "aberration in the vital processes of the cell " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, hdene:Howard Dene , Mouse Genome Informatics Curator]
Show

Allelic Composition: Crb2tm1.1Wij/Crb2tm1.1Wij,Tg(Crx-cre)1Tfur/0
Genetic Background: involves: 129P2/OlaHsd * C57BL/6J

 MP:0011087 complete neonatal lethality "death of all organisms of a given genotype in a population within the neonatal period after birth (Mus: P0)" [MGI:csmith]
Show

Allelic Composition: Catf/Catf
Genetic Background: Not Specified

 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Smurf2tm1b(EUCOMM)Wtsi/Smurf2tm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Smurf2tm1b(EUCOMM)Wtsi/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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