ENSGALG00000028996


Gallus gallus

Features
Gene ID: ENSGALG00000028996
  
Biological name :SIGMAR1
  
Synonyms : Q5ZL84 / Sigma non-opioid intracellular receptor 1 / SIGMAR1
  
Possible biological names infered from orthology : O55242 / Q99720
  
Species: Gallus gallus
  
Chr. number: Z
Strand: -1
Band:
Gene start: 7940963
Gene end: 7943942
  
Corresponding Affymetrix probe sets: Gga.7688.2.S1_at (Chicken Array)   Gga.7688.2.S1_s_at (Chicken Array)   Gga.7688.3.S1_at (Chicken Array)   GgaAffx.11953.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000042968
Ensembl peptide - ENSGALP00000056917
Ensembl peptide - ENSGALP00000046780
NCBI entrez gene - 100859748     See in Manteia.
RefSeq - NM_001318004
RefSeq - NM_001270557
RefSeq Peptide - NP_001257486
RefSeq Peptide - NP_001304933
swissprot - Q5ZL84
swissprot - A0A1D5PVF0
swissprot - A0A1D5P285
Ensembl - ENSGALG00000028996
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sigmar1ENSDARG00000011418Danio rerio
 Q99720ENSG00000147955Homo sapiens
 O55242ENSMUSG00000036078Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006716  ERG2/sigma1 receptor-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IEA
 biological_processGO:0043523 regulation of neuron apoptotic process IEA
 biological_processGO:0070207 protein homotrimerization IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005637 nuclear inner membrane IEA
 cellular_componentGO:0005640 nuclear outer membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane ISS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr