ENSGALG00000029616


Gallus gallus

Features
Gene ID: ENSGALG00000029616
  
Biological name :HCFC2
  
Synonyms : HCFC2 / host cell factor C2
  
Possible biological names infered from orthology : Q9Y5Z7
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 54701770
Gene end: 54724511
  
Corresponding Affymetrix probe sets: Gga.12626.1.S1_at (Chicken Array)   Gga.12626.2.S1_a_at (Chicken Array)   Gga.12626.2.S1_s_at (Chicken Array)   Gga.9676.1.S1_at (Chicken Array)   Gga.9676.1.S1_s_at (Chicken Array)   GgaAffx.20520.1.S1_at (Chicken Array)   GgaAffx.23983.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044607
Ensembl peptide - ENSGALP00000053096
Ensembl peptide - ENSGALP00000045072
NCBI entrez gene - 418083     See in Manteia.
RefSeq - XM_004937828
RefSeq - XM_004937829
RefSeq - XM_015287764
RefSeq - XM_015287771
swissprot - A0A1D5NXH6
swissprot - A0A1D5NW71
swissprot - A0A1D5PJV0
Ensembl - ENSGALG00000029616
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hcfc2ENSDARG00000058127Danio rerio
 HCFC2ENSG00000111727Homo sapiens
 Hcfc2ENSMUSG00000020246Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KLHDC1 / kelch domain containing 1 / Q80YG3* / Q8N7A1* / Kelch domain-containing protein 1 *ENSGALG0000001224112
KLHDC3 / kelch domain containing 3 / Q9BQ90*ENSGALG0000000853612
RABEPK / rab9 effector protein with kelch motifs / Q7Z6M1* / Q8VCH5*ENSGALG0000004221011
KLHDC2 / kelch domain containing 2 / Q4G5Y1* / Q9Y2U9* / Kelch domain-containing protein 2 *ENSGALG0000001224410
LZTR1 / leucine zipper like transcription regulator 1 / Q8N653* / Q9CQ33* / Mus musculus leucine-zipper-like transcriptional regulator, 1 (Lztr1), transcript variant 2, mRNA.*ENSGALG000000311759
KLHDC10 / kelch domain containing 10 / Q6PAR0* / Q6PID8* / Kelch domain-containing protein 10 *ENSGALG000000080138
ENSGALG000000104567


Protein motifs (from Interpro)
Interpro ID Name
 IPR003961  Fibronectin type III
 IPR006652  Kelch repeat type 1
 IPR013783  Immunoglobulin-like fold
 IPR015915  Kelch-type beta propeller


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0071339 MLL1 complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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