ENSG00000111727


Homo sapiens

Features
Gene ID: ENSG00000111727
  
Biological name :HCFC2
  
Synonyms : HCFC2 / host cell factor C2 / Q9Y5Z7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q23.3
Gene start: 104064457
Gene end: 104106524
  
Corresponding Affymetrix probe sets: 219484_at (Human Genome U133 Plus 2.0 Array)   235264_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000229330
Ensembl peptide - ENSP00000442942
Ensembl peptide - ENSP00000447952
NCBI entrez gene - 29915     See in Manteia.
OMIM - 607926
RefSeq - XM_017019242
RefSeq - NM_013320
RefSeq - XM_017019241
RefSeq Peptide - NP_037452
swissprot - Q9Y5Z7
swissprot - F8VU09
Ensembl - ENSG00000111727
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hcfc2ENSDARG00000058127Danio rerio
 HCFC2ENSGALG00000029616Gallus gallus
 Hcfc2ENSMUSG00000020246Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HCFC1 / P51610 / host cell factor C1ENSG0000017253456
Q7Z6M1 / RABEPK / Rab9 effector protein with kelch motifsENSG0000013693313
LZTR1 / Q8N653 / leucine zipper like transcription regulator 1ENSG0000009994913
KLHDC3 / Q9BQ90 / kelch domain containing 3ENSG0000012470212
KLHDC1 / Q8N7A1 / kelch domain containing 1ENSG0000019777612
KLHDC2 / Q9Y2U9 / kelch domain containing 2ENSG0000016551612
Q6PID8 / KLHDC10 / kelch domain containing 10ENSG0000012860710


Protein motifs (from Interpro)
Interpro ID Name
 IPR003961  Fibronectin type III
 IPR006652  Kelch repeat type 1
 IPR011043  Galactose oxidase/kelch, beta-propeller
 IPR013783  Immunoglobulin-like fold
 IPR015915  Kelch-type beta propeller
 IPR036116  Fibronectin type III superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II ISS
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0016032 viral process TAS
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0071339 MLL1 complex IEA
 molecular_functionGO:0003713 transcription coactivator activity TAS
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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