ENSGALG00000030147


Gallus gallus

Features
Gene ID: ENSGALG00000030147
  
Biological name :AFF4
  
Synonyms : AF4/FMR2 family member 4 / AFF4
  
Possible biological names infered from orthology : Q9ESC8 / Q9UHB7
  
Species: Gallus gallus
  
Chr. number: 13
Strand: -1
Band:
Gene start: 17170799
Gene end: 17202684
  
Corresponding Affymetrix probe sets: GgaAffx.4463.1.S1_at (Chicken Array)   GgaAffx.4463.2.S1_at (Chicken Array)   GgaAffx.4463.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058095
Ensembl peptide - ENSGALP00000057578
NCBI entrez gene - 416337     See in Manteia.
RefSeq - XM_004945032
RefSeq - XM_004945033
RefSeq - XM_015294063
RefSeq - XM_015294064
RefSeq - XM_004945030
RefSeq - XM_004945031
swissprot - A0A1D5PYP0
Ensembl - ENSGALG00000030147
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 aff4ENSDARG00000001857Danio rerio
 AFF4ENSG00000072364Homo sapiens
 Aff4ENSMUSG00000049470Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AFF1 / AF4/FMR2 family member 1 / P51825*ENSGALG0000004393538
AFF2 / AF4/FMR2 family member 2 / O55112* / P51816*ENSGALG0000000916837
AFF3* / P51826* / AF4/FMR2 family member 3*ENSGALG0000001676714
AFF3* / P51826* / AF4/FMR2 family member 3*ENSGALG0000003150211


Protein motifs (from Interpro)
Interpro ID Name
 IPR007797  Transcription factor AF4/FMR2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007286 spermatid development IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0008023 transcription elongation factor complex IEA
 cellular_componentGO:0035327 transcriptionally active chromatin IEA


Pathways (from Reactome)
Pathway description
Formation of RNA Pol II elongation complex
RNA Polymerase II Pre-transcription Events
RNA Polymerase II Transcription Elongation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr