ENSGALG00000030378


Gallus gallus

Features
Gene ID: ENSGALG00000030378
  
Biological name :RPL11
  
Synonyms : ribosomal protein L11 / RPL11
  
Possible biological names infered from orthology : 60S ribosomal protein L11 / Gm10036 / Gm5093 / P62913 / Q9CXW4
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 5580600
Gene end: 5583706
  
Corresponding Affymetrix probe sets: Gga.4687.1.S1_at (Chicken Array)   GgaAffx.13031.1.S1_at (Chicken Array)   GgaAffx.13031.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044816
Ensembl peptide - ENSGALP00000060693
Ensembl peptide - ENSGALP00000052981
Ensembl peptide - ENSGALP00000052854
Ensembl peptide - ENSGALP00000051877
Ensembl peptide - ENSGALP00000047166
NCBI entrez gene - 419682     See in Manteia.
RefSeq - NM_001305188
RefSeq Peptide - NP_001292117
swissprot - A0A1D5PJ62
swissprot - A0A1D5PGF5
swissprot - A0A1L1RPG7
swissprot - A0A1D5NWS4
swissprot - A0A1D5P3B1
swissprot - A0A1D5PJI7
Ensembl - ENSGALG00000030378
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl11ENSDARG00000043509Danio rerio
 RPL11ENSG00000142676Homo sapiens
 Gm10036ENSMUSG00000058064Mus musculus
 Gm5093ENSMUSG00000091742Mus musculus
 Rpl11ENSMUSG00000059291Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002132  Ribosomal protein L5
 IPR020929  Ribosomal protein L5, conserved site
 IPR022803  Ribosomal protein L5 domain superfamily
 IPR031309  Ribosomal protein L5, C-terminal
 IPR031310  Ribosomal protein L5, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr