ENSMUSG00000059291


Mus musculus

Features
Gene ID: ENSMUSG00000059291
  
Biological name :Rpl11
  
Synonyms : 60S ribosomal protein L11 / Q9CXW4 / Rpl11
  
Possible biological names infered from orthology : P62913 / ribosomal protein L11
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D3
Gene start: 136028265
Gene end: 136053428
  
Corresponding Affymetrix probe sets: 10451301 (MoGene1.0st)   10454097 (MoGene1.0st)   10502745 (MoGene1.0st)   10517457 (MoGene1.0st)   10528544 (MoGene1.0st)   10594142 (MoGene1.0st)   1417615_a_at (Mouse Genome 430 2.0 Array)   1448773_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000121108
Ensembl peptide - ENSMUSP00000099595
NCBI entrez gene - 67025     See in Manteia.
MGI - MGI:1914275
RefSeq - NM_025919
RefSeq - XM_006539112
RefSeq Peptide - NP_080195
swissprot - A2BH06
swissprot - Q9CXW4
Ensembl - ENSMUSG00000059291
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl11ENSDARG00000043509Danio rerio
 RPL11ENSGALG00000030378Gallus gallus
 RPL11ENSG00000142676Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gm10036ENSMUSG0000005806499
Gm5093 / RPL11* / P62913* / ribosomal protein L11*ENSMUSG0000009174294


Protein motifs (from Interpro)
Interpro ID Name
 IPR002132  Ribosomal protein L5
 IPR020929  Ribosomal protein L5, conserved site
 IPR022803  Ribosomal protein L5 domain superfamily
 IPR031309  Ribosomal protein L5, C-terminal
 IPR031310  Ribosomal protein L5, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly ISO
 biological_processGO:0006364 rRNA processing ISO
 biological_processGO:0006412 translation IEA
 biological_processGO:0006605 protein targeting ISO
 biological_processGO:0010628 positive regulation of gene expression ISO
 biological_processGO:0032092 positive regulation of protein binding ISO
 biological_processGO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IMP
 biological_processGO:0034504 protein localization to nucleus IMP
 biological_processGO:0042273 ribosomal large subunit biogenesis ISO
 biological_processGO:0050821 protein stabilization ISO
 biological_processGO:1901796 regulation of signal transduction by p53 class mediator ISO
 biological_processGO:1901798 positive regulation of signal transduction by p53 class mediator IMP
 biological_processGO:1902255 positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator IMP
 biological_processGO:1904667 negative regulation of ubiquitin protein ligase activity ISO
 biological_processGO:2000059 negative regulation of ubiquitin-dependent protein catabolic process ISO
 biological_processGO:2000435 negative regulation of protein neddylation ISO
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0031012 extracellular matrix ISO
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008097 5S rRNA binding ISO
 molecular_functionGO:0019843 rRNA binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding ISO
 molecular_functionGO:1990948 ubiquitin ligase inhibitor activity ISO


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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