ENSGALG00000031238


Gallus gallus

Features
Gene ID: ENSGALG00000031238
  
Biological name :SLIRP
  
Synonyms : SLIRP / SRA stem-loop interacting RNA binding protein
  
Possible biological names infered from orthology : Q9D8T7 / Q9GZT3
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 39402829
Gene end: 39405842
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000045556
Ensembl peptide - ENSGALP00000048469
Ensembl peptide - ENSGALP00000061256
NCBI entrez gene - 772054     See in Manteia.
RefSeq - XM_001235248
swissprot - A0A1D5P6Y8
swissprot - A0A1L1RR29
Ensembl - ENSGALG00000031238
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slirpENSDARG00000097753Danio rerio
 SLIRPENSG00000119705Homo sapiens
 SlirpENSMUSG00000021040Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000961 negative regulation of mitochondrial RNA catabolic process IEA
 biological_processGO:0007286 spermatid development IEA
 biological_processGO:0007338 single fertilization IEA
 biological_processGO:0030317 flagellated sperm motility IEA
 biological_processGO:0070584 mitochondrion morphogenesis IEA
 cellular_componentGO:0001669 acrosomal vesicle IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0036126 sperm flagellum IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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