ENSGALG00000032734


Gallus gallus

Features
Gene ID: ENSGALG00000032734
  
Biological name :RNF139
  
Synonyms : E3 ubiquitin-protein ligase RNF139 / RNF139
  
Possible biological names infered from orthology : Q8WU17 / ring finger protein 139
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 138579210
Gene end: 138585669
  
Corresponding Affymetrix probe sets: Gga.17221.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050248
NCBI entrez gene - 420338     See in Manteia.
RefSeq - NM_001030955
RefSeq Peptide - NP_001026126
swissprot - A0A1D5PBW6
Ensembl - ENSGALG00000032734
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf139ENSDARG00000036929Danio rerio
 Q8WU17ENSG00000170881Homo sapiens
 Rnf139ENSMUSG00000037075Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RNF145 / ring finger protein 145 / Q5SWK7* / Q96MT1*ENSGALG0000000369124
AMFR / autocrine motility factor receptor / Q9R049* / Q9UKV5* / E3 ubiquitin-protein ligase AMFR *ENSGALG0000000310711


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR011016  Zinc finger, RING-CH-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR025754  TRC8 N-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0017148 negative regulation of translation IEA
 biological_processGO:0031396 regulation of protein ubiquitination IEA
 biological_processGO:0031648 protein destabilization IEA
 biological_processGO:0036503 ERAD pathway IEA
 biological_processGO:0060628 regulation of ER to Golgi vesicle-mediated transport IEA
 biological_processGO:0070613 regulation of protein processing IEA
 biological_processGO:2000060 positive regulation of ubiquitin-dependent protein catabolic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0036513 Derlin-1 retrotranslocation complex IEA
 molecular_functionGO:0002020 protease binding IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0019787 ubiquitin-like protein transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
ER Quality Control Compartment (ERQC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr