ENSGALG00000033074


Gallus gallus

Features
Gene ID: ENSGALG00000033074
  
Biological name :ARID2
  
Synonyms : ARID2 / AT-rich interaction domain 2
  
Possible biological names infered from orthology : AT-rich interactive domain-containing protein 2 / E9Q7E2 / Q68CP9
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 30752198
Gene end: 30856043
  
Corresponding Affymetrix probe sets: GgaAffx.6069.1.S1_s_at (Chicken Array)   GgaAffx.6069.3.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046944
Ensembl peptide - ENSGALP00000053887
NCBI entrez gene - 417804     See in Manteia.
RefSeq - XM_004937551
RefSeq - XM_004937552
RefSeq - XM_004937554
RefSeq - XM_416046
swissprot - A0A1D5PM14
swissprot - A0A1D5P2P6
Ensembl - ENSGALG00000033074
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 arid2ENSDARG00000007413Danio rerio
 ARID2ENSG00000189079Homo sapiens
 Arid2ENSMUSG00000033237Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001606  ARID DNA-binding domain
 IPR003150  DNA-binding RFX-type winged-helix domain
 IPR011991  ArsR-like helix-turn-helix domain
 IPR016024  Armadillo-type fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003007 heart morphogenesis IEA
 biological_processGO:0006337 nucleosome disassembly IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0030336 negative regulation of cell migration IEA
 biological_processGO:0042592 homeostatic process IEA
 biological_processGO:0048568 embryonic organ development IEA
 biological_processGO:0060038 cardiac muscle cell proliferation IEA
 biological_processGO:0060982 coronary artery morphogenesis IEA
 biological_processGO:0072358 cardiovascular system development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr