ENSGALG00000033301


Gallus gallus

Features
Gene ID: ENSGALG00000033301
  
Biological name :DCAF1
  
Synonyms : DCAF1 / DDB1 and CUL4 associated factor 1
  
Possible biological names infered from orthology : Q80TR8 / Q9Y4B6
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 2198730
Gene end: 2247057
  
Corresponding Affymetrix probe sets: Gga.18950.1.S1_s_at (Chicken Array)   GgaAffx.1598.1.S1_at (Chicken Array)   GgaAffx.25474.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044629
Ensembl peptide - ENSGALP00000057997
Ensembl peptide - ENSGALP00000052928
Ensembl peptide - ENSGALP00000051405
NCBI entrez gene - 415921     See in Manteia.
RefSeq - XM_004944402
RefSeq - XM_015292904
RefSeq - XM_015292905
RefSeq - XM_015292906
swissprot - A0A1D5PF43
swissprot - A0A1D5NW92
swissprot - A0A1D5PJD5
Ensembl - ENSGALG00000033301
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DCAF1ENSG00000145041Homo sapiens
 Dcaf1ENSMUSG00000040325Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006594  LIS1 homology motif
 IPR011989  Armadillo-like helical
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016024  Armadillo-type fold
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030183 B cell differentiation IEA
 biological_processGO:0033151 V(D)J recombination IEA
 biological_processGO:0035212 cell competition in a multicellular organism IEA
 biological_processGO:1990245 histone H2A-T120 phosphorylation IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0008180 COP9 signalosome IEA
 cellular_componentGO:0080008 Cul4-RING E3 ubiquitin ligase complex IEA
 molecular_functionGO:0030331 estrogen receptor binding IEA
 molecular_functionGO:1990244 histone kinase activity (H2A-T120 specific) IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr