ENSGALG00000034592


Gallus gallus

Features
Gene ID: ENSGALG00000034592
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : KDM4B / lysine demethylase 4B / Lysine-specific demethylase 4B / O94953 / Q91VY5
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 4813319
Gene end: 4843107
  
Corresponding Affymetrix probe sets: Gga.12730.1.S1_at (Chicken Array)   Gga.12730.1.S1_s_at (Chicken Array)   GgaAffx.11521.1.S1_at (Chicken Array)   GgaAffx.26106.6.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045319
NCBI entrez gene - 428354     See in Manteia.
RefSeq - XM_015300185
swissprot - Q5ZMG6
Ensembl - ENSGALG00000034592
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 kdm4bENSDARG00000099675Danio rerio
 KDM4BENSG00000127663Homo sapiens
 Kdm4bENSMUSG00000024201Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KDM4C / lysine demethylase 4C / Q8VCD7* / Q9H3R0* / Mus musculus lysine (K)-specific demethylase 4C (Kdm4c), transcript variant 3, mRNA.*ENSGALG0000002055781
KDM4A* / O75164* / Q8BW72* / AL451062.3* / lysine demethylase 4A* / Lysine-specific demethylase 4A *ENSGALG0000004164770
KDM4A* / O75164* / Q8BW72* / AL451062.3* / lysine demethylase 4A* / Lysine-specific demethylase 4A *ENSGALG000000100741


Protein motifs (from Interpro)
Interpro ID Name
 IPR003347  JmjC domain
 IPR003349  JmjN domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks
Estrogen-dependent gene expression


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr