ENSGALG00000010074


Gallus gallus

Features
Gene ID: ENSGALG00000010074
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AL451062.3 / KDM4A / lysine demethylase 4A / Lysine-specific demethylase 4A / O75164 / Q8BW72
  
Species: Gallus gallus
  
Chr. number: 8
Strand: 1
Band:
Gene start: 20229800
Gene end: 20245185
  
Corresponding Affymetrix probe sets: GgaAffx.23122.1.S1_s_at (Chicken Array)   GgaAffx.23122.4.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016357
NCBI entrez gene - 424571     See in Manteia.
RefSeq - XM_015291306
swissprot - E1C6D5
Ensembl - ENSGALG00000010074
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 kdm4aaENSDARG00000018782Danio rerio
 kdm4abENSDARG00000019103Danio rerio
 AL451062.3ENSG00000284989Homo sapiens
 KDM4AENSG00000066135Homo sapiens
 Kdm4aENSMUSG00000033326Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KDM4C / lysine demethylase 4C / Q8VCD7* / Q9H3R0* / Mus musculus lysine (K)-specific demethylase 4C (Kdm4c), transcript variant 3, mRNA.*ENSGALG0000002055743
KDM4B* / O94953* / Q91VY5* / lysine demethylase 4B* / Lysine-specific demethylase 4B *ENSGALG000000345920
KDM4A* / O75164* / Q8BW72* / AL451062.3* / lysine demethylase 4A* / Lysine-specific demethylase 4A *ENSGALG000000416470


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR002999  Tudor domain
 IPR003347  JmjC domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr