ENSGALG00000034618


Gallus gallus

Features
Gene ID: ENSGALG00000034618
  
Biological name :DCAF13
  
Synonyms : DCAF13 / DDB1- and CUL4-associated factor 13 / Q5ZLK1
  
Possible biological names infered from orthology : Q6PAC3 / Q9NV06
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 130034484
Gene end: 130057124
  
Corresponding Affymetrix probe sets: Gga.15424.1.S1_at (Chicken Array)   GgaAffx.11221.1.S1_s_at (Chicken Array)   GgaAffx.11836.1.S1_at (Chicken Array)   GgaAffx.11836.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058494
Ensembl peptide - ENSGALP00000064223
Ensembl peptide - ENSGALP00000062494
NCBI entrez gene - 420263     See in Manteia.
RefSeq - NM_001030948
RefSeq Peptide - NP_001026119
swissprot - A0A1L1RZD3
swissprot - A0A1L1RUJ7
swissprot - Q5ZLK1
Ensembl - ENSGALG00000034618
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dcaf13ENSDARG00000002267Danio rerio
 DCAF13ENSG00000164934Homo sapiens
 Dcaf13ENSMUSG00000022300Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR007287  Sof1-like protein
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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