ENSGALG00000035906


Gallus gallus

Features
Gene ID: ENSGALG00000035906
  
Biological name :YTHDC1
  
Synonyms : YTHDC1 / YTH domain containing 1
  
Possible biological names infered from orthology : E9Q5K9 / Q96MU7
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 52093350
Gene end: 52461073
  
Corresponding Affymetrix probe sets: Gga.16568.1.S1_s_at (Chicken Array)   Gga.8763.2.S1_at (Chicken Array)   GgaAffx.23669.1.S1_at (Chicken Array)   GgaAffx.23669.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051147
Ensembl peptide - ENSGALP00000060750
Ensembl peptide - ENSGALP00000052052
NCBI entrez gene - 422656     See in Manteia.
RefSeq - NM_001031147
RefSeq Peptide - NP_001026318
swissprot - A0A1L1RPM4
swissprot - A0A1D5PGX6
swissprot - A0A1D5PEE5
Ensembl - ENSGALG00000035906
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ythdc1ENSDARG00000051953Danio rerio
 Q96MU7ENSG00000083896Homo sapiens
 E9Q5K9ENSMUSG00000035851Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG000000330760


Protein motifs (from Interpro)
Interpro ID Name
 IPR007275  YTH domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010608 posttranscriptional regulation of gene expression IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr