ENSGALG00000036284


Gallus gallus

Features
Gene ID: ENSGALG00000036284
  
Biological name :RPGR
  
Synonyms : retinitis pigmentosa GTPase regulator / RPGR
  
Possible biological names infered from orthology : Q92834
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 112926210
Gene end: 112983863
  
Corresponding Affymetrix probe sets: Gga.14511.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047296
NCBI entrez gene - 418578     See in Manteia.
RefSeq - XM_015302002
swissprot - A0A1D5P3P1
Ensembl - ENSGALG00000036284
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpgraENSDARG00000056617Danio rerio
 rpgrbENSDARG00000057074Danio rerio
 RPGRENSG00000156313Homo sapiens
 RpgrENSMUSG00000031174Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RCC2 / regulator of chromosome condensation 2 / Q8BK67* / Q9P258* / Protein RCC2 *ENSGALG0000003168416
O95199* / Q99LJ7* / RCBTB2* / RCC1 and BTB domain containing protein 2* / regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2*ENSGALG0000001700015
RCBTB1 / RCC1 and BTB domain containing protein 1 / Q8NDN9* / regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1*ENSGALG0000001700815
RCC1 / regulator of chromosome condensation 1 / P18754* / Q8VE37*ENSGALG0000003009714
RCC1L / Williams-Beuren syndrome chromosomal region 16 protein / Q9CYF5* / Q96I51* / RCC1 like* / reculator of chromosome condensation 1 like*ENSGALG0000000117414
SERGEF / secretion regulating guanine nucleotide exchange factor / Q80YD6* / Q9UGK8*ENSGALG0000000623111


Protein motifs (from Interpro)
Interpro ID Name
 IPR000408  Regulator of chromosome condensation, RCC1
 IPR009091  Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0060271 cilium assembly IEA
 cellular_componentGO:0001750 photoreceptor outer segment IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005813 centrosome IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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