ENSGALG00000036774


Gallus gallus

Features
Gene ID: ENSGALG00000036774
  
Biological name :RPL17
  
Synonyms : RPL17
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 1078261
Gene end: 1081587
  
Corresponding Affymetrix probe sets: Gga.13567.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048941
Ensembl peptide - ENSGALP00000063645
Ensembl peptide - ENSGALP00000060639
NCBI entrez gene - 426845     See in Manteia.
RefSeq - NM_001282277
RefSeq - XM_015277291
RefSeq Peptide - NP_001269206
swissprot - A0A1L1S043
swissprot - A0A1D5PR40
swissprot - A0A1D5PPM0
Ensembl - ENSGALG00000036774
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl17ENSDARG00000057556Danio rerio
 Rpl17ENSMUSG00000062328Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RPL17* / P18621* / RPL17-C18orf32* / ribosomal protein L17* / RPL17-C18orf32 readthrough*ENSGALG0000004026395
Gm6133*ENSGALG0000004150049


Protein motifs (from Interpro)
Interpro ID Name
 IPR001063  Ribosomal protein L22/L17
 IPR005721  Ribosomal protein L22/L17, eukaryotic/archaeal
 IPR018260  Ribosomal protein L22/L17, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit IEA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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