ENSGALG00000036833


Gallus gallus

Features
Gene ID: ENSGALG00000036833
  
Biological name :PAXBP1
  
Synonyms : PAX3 and PAX7 binding protein 1 / PAXBP1
  
Possible biological names infered from orthology : P58501 / Q9Y5B6
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 105074236
Gene end: 105098431
  
Corresponding Affymetrix probe sets: Gga.13720.1.S1_at (Chicken Array)   Gga.13720.1.S1_s_at (Chicken Array)   Gga.14840.1.S1_s_at (Chicken Array)   Gga.1672.1.S1_at (Chicken Array)   GgaAffx.24812.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058092
NCBI entrez gene - 418499     See in Manteia.
RefSeq - XM_015299881
RefSeq - XM_416707
swissprot - A0A1D5PYN7
Ensembl - ENSGALG00000036833
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PAXBP1ENSDARG00000062361Danio rerio
 PAXBP1ENSG00000159086Homo sapiens
 P58501ENSMUSG00000022974Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG0000004462213
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG0000004566713
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG0000004394013
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG0000004532813
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG0000004414311
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000463519
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000441219
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000463179
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000460789
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000452509
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000463659
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000167329
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000462209
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000458008
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000445588
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000457088
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000465227
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000445525
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000461485
GCFC2* / P16383* / Q8BKT3* / GC-rich sequence DNA-binding factor 2*ENSGALG000000447365


Protein motifs (from Interpro)
Interpro ID Name
 IPR012890  GC-rich sequence DNA-binding factor
 IPR022783  GC-rich sequence DNA-binding factor-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0014842 regulation of skeletal muscle satellite cell proliferation IEA
 biological_processGO:0031062 positive regulation of histone methylation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:2000288 positive regulation of myoblast proliferation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008134 transcription factor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr