ENSMUSG00000022974


Mus musculus

Features
Gene ID: ENSMUSG00000022974
  
Biological name :Paxbp1
  
Synonyms : P58501 / PAX3- and PAX7-binding protein 1 / Paxbp1
  
Possible biological names infered from orthology : Q9Y5B6
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: C3.3
Gene start: 91014037
Gene end: 91044543
  
Corresponding Affymetrix probe sets: 10440881 (MoGene1.0st)   1418007_at (Mouse Genome 430 2.0 Array)   1418008_at (Mouse Genome 430 2.0 Array)   1418009_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000117142
Ensembl peptide - ENSMUSP00000023698
Ensembl peptide - ENSMUSP00000113835
NCBI entrez gene - 67367     See in Manteia.
MGI - MGI:1914617
RefSeq - NM_026110
RefSeq Peptide - NP_080386
swissprot - P58501
swissprot - F6YS88
swissprot - F6YY19
Ensembl - ENSMUSG00000022974
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PAXBP1ENSDARG00000062361Danio rerio
 PAXBP1ENSGALG00000036833Gallus gallus
 PAXBP1ENSG00000159086Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gcfc2 / Q8BKT3 / GC-rich sequence DNA-binding factor 2 / P16383*ENSMUSG0000003512526


Protein motifs (from Interpro)
Interpro ID Name
 IPR012890  GC-rich sequence DNA-binding factor
 IPR022783  GC-rich sequence DNA-binding factor-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007517 muscle organ development IEA
 biological_processGO:0014842 regulation of skeletal muscle satellite cell proliferation IMP
 biological_processGO:0031062 positive regulation of histone methylation IGI
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IMP
 biological_processGO:2000288 positive regulation of myoblast proliferation IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008134 transcription factor binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr