ENSGALG00000037076


Gallus gallus

Features
Gene ID: ENSGALG00000037076
  
Biological name :GART
  
Synonyms : GART / trifunctional purine biosynthetic protein adenosine-3
  
Possible biological names infered from orthology : Mus musculus phosphoribosylglycinamide formyltransferase (Gart), transcript variant 2, mRNA. / P22102 / phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase / Q64737
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 105352798
Gene end: 105389904
  
Corresponding Affymetrix probe sets: Gga.4704.1.S1_at (Chicken Array)   Gga.4704.2.S1_a_at (Chicken Array)   GgaAffx.20713.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054045
Ensembl peptide - ENSGALP00000049365
NCBI entrez gene - 395315     See in Manteia.
RefSeq - XM_015299235
RefSeq - NM_001001469
RefSeq - XM_015299227
RefSeq - XM_015299230
RefSeq - XM_015299217
RefSeq Peptide - NP_001001469
swissprot - A0A547
Ensembl - ENSGALG00000037076
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gartENSDARG00000101089Danio rerio
 GARTENSG00000159131Homo sapiens
 GartENSMUSG00000022962Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000003319967


Protein motifs (from Interpro)
Interpro ID Name
 IPR000115  Phosphoribosylglycinamide synthetase
 IPR001555  Phosphoribosylglycinamide formyltransferase, active site
 IPR002376  Formyl transferase, N-terminal
 IPR004607  Phosphoribosylglycinamide formyltransferase
 IPR004733  Phosphoribosylformylglycinamidine cyclo-ligase
 IPR010918  PurM-like, C-terminal domain
 IPR011054  Rudiment single hybrid motif
 IPR011761  ATP-grasp fold
 IPR013815  ATP-grasp fold, subdomain 1
 IPR016185  Pre-ATP-grasp domain superfamily
 IPR016188  PurM-like, N-terminal domain
 IPR020559  Phosphoribosylglycinamide synthetase, conserved site
 IPR020560  Phosphoribosylglycinamide synthetase, C-domain
 IPR020561  Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
 IPR020562  Phosphoribosylglycinamide synthetase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006164 purine nucleotide biosynthetic process IEA
 biological_processGO:0006189 "de novo" IMP biosynthetic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009058 biosynthetic process IEA
 biological_processGO:0009113 purine nucleobase biosynthetic process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004637 phosphoribosylamine-glycine ligase activity IEA
 molecular_functionGO:0004641 phosphoribosylformylglycinamidine cyclo-ligase activity IEA
 molecular_functionGO:0004644 phosphoribosylglycinamide formyltransferase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016742 hydroxymethyl-, formyl- and related transferase activity IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Purine ribonucleoside monophosphate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr