ENSGALG00000037453


Gallus gallus

Features
Gene ID: ENSGALG00000037453
  
Biological name :TERF1
  
Synonyms : telomeric repeat-binding factor 1 / TERF1
  
Possible biological names infered from orthology : P54274 / P70371
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 118052590
Gene end: 118075361
  
Corresponding Affymetrix probe sets: Gga.8451.1.S1_a_at (Chicken Array)   Gga.8451.1.S2_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048506
Ensembl peptide - ENSGALP00000050214
NCBI entrez gene - 378896     See in Manteia.
RefSeq - NM_204380
RefSeq Peptide - NP_989711
swissprot - A0A1D5PBT4
swissprot - A0A1D5P723
Ensembl - ENSGALG00000037453
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 terf1ENSDARG00000058710Danio rerio
 TERF1ENSG00000147601Homo sapiens
 Terf1ENSMUSG00000025925Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TERF2 / O35144* / Q15554* / telomeric repeat binding factor 2*ENSGALG0000000065724


Protein motifs (from Interpro)
Interpro ID Name
 IPR001005  SANT/Myb domain
 IPR009057  Homeobox-like domain superfamily
 IPR013867  Telomere repeat-binding factor, dimerisation domain
 IPR017930  Myb domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000723 telomere maintenance IEA
 biological_processGO:0007004 telomere maintenance via telomerase IEA
 biological_processGO:0008156 negative regulation of DNA replication IEA
 biological_processGO:0032211 negative regulation of telomere maintenance via telomerase IEA
 biological_processGO:0045141 meiotic telomere clustering IEA
 biological_processGO:0051974 negative regulation of telomerase activity IEA
 biological_processGO:0061820 telomeric D-loop disassembly IEA
 biological_processGO:1904792 positive regulation of shelterin complex assembly IEA
 biological_processGO:1904850 negative regulation of establishment of protein localization to telomere IEA
 biological_processGO:1904911 negative regulation of establishment of RNA localization to telomere IEA
 biological_processGO:1905778 negative regulation of exonuclease activity IEA
 biological_processGO:1905839 negative regulation of telomeric D-loop disassembly IEA
 cellular_componentGO:0000783 nuclear telomere cap complex IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0070187 shelterin complex IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003691 double-stranded telomeric DNA binding IEA
 molecular_functionGO:0003720 telomerase activity IEA
 molecular_functionGO:0008301 DNA binding, bending IEA
 molecular_functionGO:0042162 telomeric DNA binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0071532 ankyrin repeat binding IEA
 molecular_functionGO:0098505 G-rich strand telomeric DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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