ENSGALG00000037597


Gallus gallus

Features
Gene ID: ENSGALG00000037597
  
Biological name :YOD1
  
Synonyms : Q5F3A6 / Ubiquitin thioesterase OTU1 / YOD1
  
Possible biological names infered from orthology : Q5VVQ6 / Q8CB27 / YOD1 deubiquitinase
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 2614871
Gene end: 2618442
  
Corresponding Affymetrix probe sets: Gga.9399.1.S1_at (Chicken Array)   GgaAffx.21721.1.S1_s_at (Chicken Array)   GgaAffx.717.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048440
NCBI entrez gene - 428266     See in Manteia.
RefSeq - NM_001031499
RefSeq Peptide - NP_001026670
swissprot - Q5F3A6
Ensembl - ENSGALG00000037597
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 yod1ENSDARG00000008542Danio rerio
 YOD1ENSG00000180667Homo sapiens
 Yod1ENSMUSG00000046404Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003323  OTU domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006986 response to unfolded protein IEA
 biological_processGO:0016236 macroautophagy IEA
 biological_processGO:0016579 protein deubiquitination IBA
 biological_processGO:0030433 ubiquitin-dependent ERAD pathway IEA
 biological_processGO:0030968 endoplasmic reticulum unfolded protein response IEA
 biological_processGO:0035523 protein K29-linked deubiquitination IEA
 biological_processGO:0035871 protein K11-linked deubiquitination IEA
 biological_processGO:0070536 protein K63-linked deubiquitination IEA
 biological_processGO:0071108 protein K48-linked deubiquitination IEA
 biological_processGO:1904153 negative regulation of retrograde protein transport, ER to cytosol IEA
 biological_processGO:1990167 protein K27-linked deubiquitination IEA
 biological_processGO:1990168 protein K33-linked deubiquitination IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:1904265 ubiquitin-specific protease activity involved in negative regulation of retrograde protein transport, ER to cytosol IEA
 molecular_functionGO:1990380 Lys48-specific deubiquitinase activity IEA


Pathways (from Reactome)
Pathway description
Ovarian tumor domain proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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