ENSGALG00000037875


Gallus gallus

Features
Gene ID: ENSGALG00000037875
  
Biological name :RBP1
  
Synonyms : RBP1 / retinol binding protein 1
  
Possible biological names infered from orthology : P09455 / Q00915 / retinol binding protein 1, cellular
  
Species: Gallus gallus
  
Chr. number: 9
Strand: -1
Band:
Gene start: 5939148
Gene end: 5956961
  
Corresponding Affymetrix probe sets: Gga.8654.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048330
NCBI entrez gene - 424821     See in Manteia.
RefSeq - NM_001277416
RefSeq - XM_015276907
RefSeq Peptide - NP_001264345
swissprot - A0A1D5P6K3
Ensembl - ENSGALG00000037875
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbp1ENSDARG00000018077Danio rerio
 RBP1 (1 of many)ENSDARG00000038742Danio rerio
 RBP1ENSG00000114115Homo sapiens
 Rbp1ENSMUSG00000046402Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBP7 / retinol binding protein 7 / Q96R05* / Q9EPC5* / retinol binding protein 7, cellular*ENSGALG0000000263757
RBP2 / retinol binding protein 2 / P50120* / Q08652* / retinol binding protein 2, cellular*ENSGALG0000000532757
RBP5 / retinol binding protein 5 / P82980*ENSGALG0000001466253
CRABP2 / cellular retinoic acid binding protein 2 / P22935* / P29373*ENSGALG0000002914042
P40220 / CRABP-I / Cellular retinoic acid-binding protein 1 / CRABP1* / P29762* / P62965*ENSGALG0000000319340
FABP5 / fatty acid binding protein 5 / Q01469* / Q05816* / Fatty acid-binding protein, epidermal *ENSGALG0000004134436
FABP4 / fatty acid-binding protein, adipocyte / P04117* / P15090* / fatty acid binding protein 4*ENSGALG0000003002536
FABP3 / fatty acid-binding protein, heart / P05413* / P11404* / fatty acid binding protein 3*ENSGALG0000003705035
FABP7 / Q05423 / Fatty acid-binding protein, brain / O15540* / P51880* / fatty acid binding protein 7*ENSGALG0000003893335
PMP2 / peripheral myelin protein 2 / P02689* / P24526*ENSGALG0000003245335


Protein motifs (from Interpro)
Interpro ID Name
 IPR000463  Cytosolic fatty-acid binding
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR012674  Calycin
 IPR031259  Intracellular lipid binding protein
 IPR031264  Retinol-binding protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002138 retinoic acid biosynthetic process IEA
 biological_processGO:0006776 vitamin A metabolic process IEA
 biological_processGO:0030852 regulation of granulocyte differentiation IEA
 biological_processGO:0033189 response to vitamin A IEA
 biological_processGO:0042572 retinol metabolic process IEA
 biological_processGO:0042573 retinoic acid metabolic process IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005811 lipid droplet IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0008289 lipid binding IEA


Pathways (from Reactome)
Pathway description
The canonical retinoid cycle in rods (twilight vision)
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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