ENSG00000114115


Homo sapiens

Features
Gene ID: ENSG00000114115
  
Biological name :RBP1
  
Synonyms : P09455 / RBP1 / retinol binding protein 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: q23
Gene start: 139517434
Gene end: 139539829
  
Corresponding Affymetrix probe sets: 203423_at (Human Genome U133 Plus 2.0 Array)   239782_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000477621
Ensembl peptide - ENSP00000427492
Ensembl peptide - ENSP00000482165
Ensembl peptide - ENSP00000429166
Ensembl peptide - ENSP00000232219
Ensembl peptide - ENSP00000424813
NCBI entrez gene - 5947     See in Manteia.
OMIM - 180260
RefSeq - NM_001130992
RefSeq - NM_001130993
RefSeq - NM_002899
RefSeq Peptide - NP_001124464
RefSeq Peptide - NP_001124465
RefSeq Peptide - NP_002890
swissprot - P09455
swissprot - A0A0A0MQT0
swissprot - H0YAK8
swissprot - A0A0A0MTB9
Ensembl - ENSG00000114115
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbp1ENSDARG00000018077Danio rerio
 RBP1 (1 of many)ENSDARG00000038742Danio rerio
 RBP1ENSGALG00000037875Gallus gallus
 Rbp1ENSMUSG00000046402Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBP7 / Q96R05 / retinol binding protein 7ENSG0000016244439
RBP5 / P82980 / retinol binding protein 5ENSG0000013919438
RBP2 / P50120 / retinol binding protein 2ENSG0000011411338
CRABP2 / P29373 / cellular retinoic acid binding protein 2ENSG0000014332030
CRABP1 / P29762 / cellular retinoic acid binding protein 1ENSG0000016642628
PMP2 / P02689 / peripheral myelin protein 2ENSG0000014758825
FABP7 / O15540 / fatty acid binding protein 7ENSG0000016443425
FABP4 / P15090 / fatty acid binding protein 4ENSG0000017032324
FABP3 / P05413 / fatty acid binding protein 3ENSG0000012176923
A6NFH5 / FABP12 / fatty acid binding protein 12ENSG0000019741623
FABP9 / Q0Z7S8 / fatty acid binding protein 9ENSG0000020518623
FABP5 / Q01469 / fatty acid binding protein 5ENSG0000016468721


Protein motifs (from Interpro)
Interpro ID Name
 IPR000463  Cytosolic fatty-acid binding
 IPR000566  Lipocalin/cytosolic fatty-acid binding domain
 IPR012674  Calycin
 IPR031259  Intracellular lipid binding protein
 IPR031264  Retinol-binding protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001523 retinoid metabolic process TAS
 biological_processGO:0002138 retinoic acid biosynthetic process IEA
 biological_processGO:0006776 vitamin A metabolic process TAS
 biological_processGO:0030852 regulation of granulocyte differentiation IEA
 biological_processGO:0033189 response to vitamin A IEA
 biological_processGO:0042572 retinol metabolic process IEA
 biological_processGO:0042573 retinoic acid metabolic process IEA
 biological_processGO:0055088 lipid homeostasis IMP
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005811 lipid droplet IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0044297 cell body IEA
 molecular_functionGO:0005501 retinoid binding TAS
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0016918 retinal binding IEA
 molecular_functionGO:0019841 retinol binding IEA
 molecular_functionGO:1904768 all-trans-retinol binding IDA


Pathways (from Reactome)
Pathway description
Retinoid cycle disease events
The canonical retinoid cycle in rods (twilight vision)
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr