ENSGALG00000039254


Gallus gallus

Features
Gene ID: ENSGALG00000039254
  
Biological name :SLC17A6
  
Synonyms : SLC17A6 / vesicular glutamate transporter 2
  
Possible biological names infered from orthology : Q9P2U8 / solute carrier family 17 member 6
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 2770077
Gene end: 2798923
  
Corresponding Affymetrix probe sets: Gga.12231.1.S1_at (Chicken Array)   Gga.12231.2.S1_at (Chicken Array)   Gga.12231.2.S1_s_at (Chicken Array)   Gga.13233.1.S1_s_at (Chicken Array)   Gga.16832.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051123
Ensembl peptide - ENSGALP00000064427
Ensembl peptide - ENSGALP00000056346
Ensembl peptide - ENSGALP00000055805
NCBI entrez gene - 422971     See in Manteia.
RefSeq - NM_001168383
RefSeq - XM_015286180
RefSeq Peptide - NP_001161855
swissprot - E1C256
swissprot - A0A1L1RZY9
swissprot - A0A1D5PSC0
Ensembl - ENSGALG00000039254
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q5W8I8ENSDARG00000041150Danio rerio
 slc17a6aENSDARG00000001127Danio rerio
 Q9P2U8ENSG00000091664Homo sapiens
 Slc17a6ENSMUSG00000030500Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLC17A8 / Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. / Q8NDX2* / Q8BFU8* / solute carrier family 17 member 8* / Vesicular glutamate transporter 3 *ENSGALG0000004112275
SLC17A5 / solute carrier family 17 member 5 / Q8BN82* / Q9NRA2* / Sialin *ENSGALG0000001591633
SLC17A9 / solute carrier family 17 member 9 / Q8VCL5* / Q9BYT1*ENSGALG0000002822521


Protein motifs (from Interpro)
Interpro ID Name
 IPR011701  Major facilitator superfamily
 IPR020846  Major facilitator superfamily domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015813 L-glutamate transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0098700 neurotransmitter loading into synaptic vesicle IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IBA
 molecular_functionGO:0005313 L-glutamate transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
Organic anion transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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