ENSGALG00000039284


Gallus gallus

Features
Gene ID: ENSGALG00000039284
  
Biological name :RCN2
  
Synonyms : RCN2 / reticulocalbin-2 isoform 1 precursor
  
Possible biological names infered from orthology : Q14257 / Q8BP92 / reticulocalbin 2
  
Species: Gallus gallus
  
Chr. number: 10
Strand: -1
Band:
Gene start: 3123800
Gene end: 3134782
  
Corresponding Affymetrix probe sets: Gga.6144.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048094
Ensembl peptide - ENSGALP00000062670
Ensembl peptide - ENSGALP00000060689
Ensembl peptide - ENSGALP00000059724
Ensembl peptide - ENSGALP00000058660
NCBI entrez gene - 415350     See in Manteia.
RefSeq - NM_001293208
RefSeq - NM_001293230
RefSeq Peptide - NP_001280159
RefSeq Peptide - NP_001280137
swissprot - A0A1L1RLT3
swissprot - A0A1L1RPG5
swissprot - A0A1L1RV23
swissprot - A0A1D5P5X1
Ensembl - ENSGALG00000039284
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rcn2ENSDARG00000039378Danio rerio
 RCN2ENSG00000117906Homo sapiens
 Rcn2ENSMUSG00000032320Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RCN1* / Q05186* / Q15293* / AL035078.4* / Reticulocalbin-1 *ENSGALG0000001212136
SDF4 / Q5ZKE5 / 45 kDa calcium-binding protein / Q61112* / Q9BRK5* / stromal cell derived factor 4*ENSGALG0000000187228


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr