ENSGALG00000012121


Gallus gallus

Features
Gene ID: ENSGALG00000012121
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : AL035078.4 / Q05186 / Q15293 / RCN1 / Reticulocalbin-1
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 5325871
Gene end: 5333060
  
Corresponding Affymetrix probe sets: Gga.12288.1.S1_at (Chicken Array)   Gga.4207.1.S1_at (Chicken Array)   GgaAffx.23792.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000039313
NCBI entrez gene - 428602     See in Manteia.
RefSeq - XM_426159
swissprot - E1BXF4
Ensembl - ENSGALG00000012121
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rcn1ENSDARG00000070006Danio rerio
 Q15293ENSG00000285283Homo sapiens
 RCN1ENSG00000049449Homo sapiens
 Rcn1ENSMUSG00000005973Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RCN2 / reticulocalbin-2 isoform 1 precursor / Q14257* / Q8BP92* / reticulocalbin 2*ENSGALG0000003928434
SDF4 / Q5ZKE5 / 45 kDa calcium-binding protein / Q61112* / Q9BRK5* / stromal cell derived factor 4*ENSGALG0000000187224


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR027241  Reticulocalbin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0043010 camera-type eye development IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr