ENSMUSG00000005973


Mus musculus

Features
Gene ID: ENSMUSG00000005973
  
Biological name :Rcn1
  
Synonyms : Q05186 / Rcn1 / Reticulocalbin-1
  
Possible biological names infered from orthology : AL035078.4 / Q15293
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: E3
Gene start: 105386291
Gene end: 105399319
  
Corresponding Affymetrix probe sets: 10485645 (MoGene1.0st)   1417090_at (Mouse Genome 430 2.0 Array)   1447890_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000006128
NCBI entrez gene - 19672     See in Manteia.
MGI - MGI:104559
RefSeq - NM_009037
RefSeq Peptide - NP_033063
swissprot - Q05186
Ensembl - ENSMUSG00000005973
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rcn1ENSDARG00000070006Danio rerio
 ENSGALG00000012121Gallus gallus
 Q15293ENSG00000285283Homo sapiens
 RCN1ENSG00000049449Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Calu / O35887 / Calumenin / O43852*ENSMUSG0000002976758
Rcn3 / Q8BH97 / Mus musculus reticulocalbin 3, EF-hand calcium binding domain (Rcn3), transcript variant 2, mRNA. / Q96D15* / reticulocalbin 3*ENSMUSG0000001953955
Rcn2 / Q8BP92 / Reticulocalbin-2 / Q14257*ENSMUSG0000003232034
Sdf4 / Q61112 / stromal cell derived factor 4 / Q9BRK5*ENSMUSG0000002907625


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR027241  Reticulocalbin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001701 in utero embryonic development IMP
 biological_processGO:0043010 camera-type eye development IMP
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005788 endoplasmic reticulum lumen IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Post-translational protein phosphorylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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