ENSMUSG00000019539


Mus musculus

Features
Gene ID: ENSMUSG00000019539
  
Biological name :Rcn3
  
Synonyms : Mus musculus reticulocalbin 3, EF-hand calcium binding domain (Rcn3), transcript variant 2, mRNA. / Q8BH97 / Rcn3
  
Possible biological names infered from orthology : Q96D15 / reticulocalbin 3
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: B3
Gene start: 45082913
Gene end: 45092221
  
Corresponding Affymetrix probe sets: 10563077 (MoGene1.0st)   1424382_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000147341
Ensembl peptide - ENSMUSP00000148227
Ensembl peptide - ENSMUSP00000147975
Ensembl peptide - ENSMUSP00000147762
Ensembl peptide - ENSMUSP00000147532
Ensembl peptide - ENSMUSP00000147420
Ensembl peptide - ENSMUSP00000019683
NCBI entrez gene - 52377     See in Manteia.
MGI - MGI:1277122
RefSeq - XM_006540987
RefSeq - NM_001355045
RefSeq - NM_026555
RefSeq - XM_006540986
RefSeq Peptide - NP_080831
RefSeq Peptide - NP_001341974
swissprot - A0A1B0GSK5
swissprot - A0A1B0GRI0
swissprot - A0A1B0GR86
swissprot - A0A1B0GS22
swissprot - A0A1B0GR19
swissprot - Q8BH97
Ensembl - ENSMUSG00000019539
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RCN3ENSG00000142552Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rcn1 / Q05186 / Reticulocalbin-1 / Q15293* / AL035078.4*ENSMUSG0000000597355
Calu / O35887 / Calumenin / O43852*ENSMUSG0000002976749
Rcn2 / Q8BP92 / Reticulocalbin-2 / Q14257*ENSMUSG0000003232033
Sdf4 / Q61112 / stromal cell derived factor 4 / Q9BRK5*ENSMUSG0000002907626


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr