ENSGALG00000039455


Gallus gallus

Features
Gene ID: ENSGALG00000039455
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 98575718
Gene end: 98605242
  
Corresponding Affymetrix probe sets: Gga.6021.1.S1_at (Chicken Array)   Gga.6021.2.S1_a_at (Chicken Array)   GgaAffx.25291.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055161
Ensembl peptide - ENSGALP00000064225
Ensembl peptide - ENSGALP00000060653
NCBI entrez gene - 107052692     See in Manteia.
RefSeq - XM_015282511
swissprot - A0A1L1RZE1
swissprot - A0A1L1RPC6
swissprot - A0A1D5PQJ6
Ensembl - ENSGALG00000039455
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 top1mtENSDARG00000027824Danio rerio
 vapalENSDARG00000115862Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
VAPB / vesicle-associated membrane protein-associated protein B/C / O95292* / VAMP associated protein B and C* / vesicle-associated membrane protein, associated protein B and C*ENSGALG0000000754960


Protein motifs (from Interpro)
Interpro ID Name
 IPR000535  Major sperm protein (MSP) domain
 IPR008962  PapD-like superfamily
 IPR016763  Vesicle-associated membrane-protein-associated protein
 IPR030229  Vesicle-associated membrane protein-associated protein A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0070972 protein localization to endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0033149 FFAT motif binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr