ENSGALG00000039878


Gallus gallus

Features
Gene ID: ENSGALG00000039878
  
Biological name :TFEB
  
Synonyms : TFEB / transcription factor EB
  
Possible biological names infered from orthology : P19484 / Q9R210
  
Species: Gallus gallus
  
Chr. number: 26
Strand: -1
Band:
Gene start: 4925991
Gene end: 4940293
  
Corresponding Affymetrix probe sets: Gga.4364.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045743
Ensembl peptide - ENSGALP00000055159
NCBI entrez gene - 419922     See in Manteia.
RefSeq - XM_015298950
RefSeq - NM_001030922
RefSeq - XM_015298948
RefSeq - XM_015298949
RefSeq Peptide - NP_001026093
swissprot - A0A1D5PQJ4
swissprot - A0A1D5NZC5
Ensembl - ENSGALG00000039878
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tfebENSDARG00000010794Danio rerio
 TFEBENSG00000112561Homo sapiens
 TfebENSMUSG00000023990Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MITF / microphthalmia-associated transcription factor / O75030* / Q08874* / melanogenesis associated transcription factor*ENSGALG0000003958344
TFEC / transcription factor EC / O14948* / Q9WTW4*ENSGALG0000004055734


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR021802  MiT/TFE transcription factors, C-terminal
 IPR024098  Transcription factor EB
 IPR031867  MiT/TFE transcription factors, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006959 humoral immune response IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr