ENSGALG00000040181


Gallus gallus

Features
Gene ID: ENSGALG00000040181
  
Biological name :EDC3
  
Synonyms : EDC3 / enhancer of mRNA-decapping protein 3
  
Possible biological names infered from orthology : enhancer of mRNA decapping 3 / Q8K2D3 / Q96F86
  
Species: Gallus gallus
  
Chr. number: 10
Strand: 1
Band:
Gene start: 2380101
Gene end: 2402224
  
Corresponding Affymetrix probe sets: Gga.1119.1.S1_at (Chicken Array)   Gga.8017.1.S1_at (Chicken Array)   GgaAffx.11765.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045770
NCBI entrez gene - 415294     See in Manteia.
RefSeq - NM_001030385
RefSeq - XM_015278797
RefSeq - XM_015278798
RefSeq Peptide - NP_001025556
swissprot - A0A1D5NZF2
Ensembl - ENSGALG00000040181
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 edc3ENSDARG00000051931Danio rerio
 EDC3ENSG00000179151Homo sapiens
 Edc3ENSMUSG00000038957Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004443  YjeF N-terminal domain
 IPR019050  FDF domain
 IPR025609  Lsm14-like, N-terminal
 IPR025762  DFDF domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:1990174 phosphodiesterase decapping endonuclease activity IEA


Pathways (from Reactome)
Pathway description
mRNA decay by 5 to 3 exoribonuclease


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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