ENSGALG00000040875


Gallus gallus

Features
Gene ID: ENSGALG00000040875
  
Biological name :EDC4
  
Synonyms : EDC4 / enhancer of mRNA decapping 4
  
Possible biological names infered from orthology : Q6P2E9
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 972739
Gene end: 1003771
  
Corresponding Affymetrix probe sets: Gga.10626.1.S1_s_at (Chicken Array)   GgaAffx.24696.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046592
Ensembl peptide - ENSGALP00000057150
NCBI entrez gene - 415656     See in Manteia.
RefSeq - XM_414022
RefSeq - XM_004944062
swissprot - A0A1D5PW21
swissprot - A0A1D5P1Q3
Ensembl - ENSGALG00000040875
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 edc4ENSDARG00000062266Danio rerio
 EDC4ENSG00000038358Homo sapiens
 Edc4ENSMUSG00000036270Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR032401  Enhancer of mRNA-decapping protein 4, WD40 repeat region


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0000932 P-body IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IEA


Pathways (from Reactome)
Pathway description
mRNA decay by 5 to 3 exoribonuclease


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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