ENSGALG00000042851


Gallus gallus

Features
Gene ID: ENSGALG00000042851
  
Biological name :PPARGC1A
  
Synonyms : peroxisome proliferator-activated receptor gamma coactivator 1-alpha / PPARGC1A
  
Possible biological names infered from orthology : O70343 / PPARG coactivator 1 alpha / Q9UBK2
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 74475027
Gene end: 74593998
  
Corresponding Affymetrix probe sets: Gga.17979.1.S1_at (Chicken Array)   GgaAffx.9142.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049671
Ensembl peptide - ENSGALP00000054281
Ensembl peptide - ENSGALP00000054176
Ensembl peptide - ENSGALP00000051111
NCBI entrez gene - 422815     See in Manteia.
RefSeq - XM_015285698
RefSeq - NM_001006457
RefSeq - XM_015285696
RefSeq - XM_015285697
RefSeq Peptide - NP_001006457
swissprot - A0A1D5PN42
swissprot - A0A1D5PMT9
swissprot - A0A1D5PEB0
swissprot - A0A1D5PAB1
Ensembl - ENSGALG00000042851
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ppargc1aENSDARG00000067829Danio rerio
 Q9UBK2ENSG00000109819Homo sapiens
 O70343ENSMUSG00000029167Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PPARGC1B / PPARG coactivator 1 beta / Q86YN6* / Q8VHJ7* / Peroxisome proliferator-activated receptor gamma coactivator 1-beta *ENSGALG0000004338929
PPRC1 / peroxisome proliferator-activated receptor gamma, coactivator-related 1 / Q5VV67* / Q6NZN1* / Mus musculus peroxisome proliferative activated receptor, gamma, coactivator-related 1 ...ENSGALG0000002074227


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002021 response to dietary excess IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007005 mitochondrion organization IEA
 biological_processGO:0010822 positive regulation of mitochondrion organization IEA
 biological_processGO:0014850 response to muscle activity IEA
 biological_processGO:0022904 respiratory electron transport chain IEA
 biological_processGO:0032922 circadian regulation of gene expression IEA
 biological_processGO:0034599 cellular response to oxidative stress IEA
 biological_processGO:0042752 regulation of circadian rhythm IEA
 biological_processGO:0043524 negative regulation of neuron apoptotic process IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IEA
 biological_processGO:0060612 adipose tissue development IEA
 biological_processGO:1901215 negative regulation of neuron death IEA
 biological_processGO:1901857 positive regulation of cellular respiration IEA
 biological_processGO:1901860 positive regulation of mitochondrial DNA metabolic process IEA
 biological_processGO:1901863 positive regulation of muscle tissue development IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 biological_processGO:2001171 positive regulation of ATP biosynthetic process IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005102 signaling receptor binding IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0016922 nuclear receptor binding IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IEA
 molecular_functionGO:0031490 chromatin DNA binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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