ENSGALG00000020742


Gallus gallus

Features
Gene ID: ENSGALG00000020742
  
Biological name :PPRC1
  
Synonyms : peroxisome proliferator-activated receptor gamma, coactivator-related 1 / PPRC1
  
Possible biological names infered from orthology : Mus musculus peroxisome proliferative activated receptor, gamma, coactivator-related 1 (Pprc1), transcript variant 2, mRNA. / Q5VV67 / Q6NZN1
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 22496300
Gene end: 22506641
  
Corresponding Affymetrix probe sets: GgaAffx.3214.1.S1_at (Chicken Array)   GgaAffx.4625.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011997
Ensembl peptide - ENSGALP00000057028
Ensembl peptide - ENSGALP00000053665
NCBI entrez gene - 423848     See in Manteia.
RefSeq - XM_015288783
swissprot - A0A1D5PVQ3
swissprot - A0A1D5PLE9
swissprot - F1N955
Ensembl - ENSGALG00000020742
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pprc1ENSDARG00000090337Danio rerio
 si:dkey-93h22.8ENSDARG00000098666Danio rerio
 PPRC1ENSG00000148840Homo sapiens
 Pprc1ENSMUSG00000055491Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PPARGC1A / peroxisome proliferator-activated receptor gamma coactivator 1-alpha / O70343* / Q9UBK2* / PPARG coactivator 1 alpha*ENSGALG0000004285113
PPARGC1B / PPARG coactivator 1 beta / Q86YN6* / Q8VHJ7* / Peroxisome proliferator-activated receptor gamma coactivator 1-beta *ENSGALG0000004338911


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IBA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008134 transcription factor binding IBA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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