ENSG00000148840


Homo sapiens

Features
Gene ID: ENSG00000148840
  
Biological name :PPRC1
  
Synonyms : peroxisome proliferator-activated receptor gamma, coactivator-related 1 / PPRC1 / Q5VV67
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: 1
Band: q24.32
Gene start: 102132994
Gene end: 102150331
  
Corresponding Affymetrix probe sets: 203737_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000399743
Ensembl peptide - ENSP00000278070
Ensembl peptide - ENSP00000359029
NCBI entrez gene - 23082     See in Manteia.
OMIM - 617462
RefSeq - XM_017015985
RefSeq - NM_001288727
RefSeq - NM_001288728
RefSeq - NM_015062
RefSeq - XM_011539549
RefSeq - XM_011539551
RefSeq - XM_011539552
RefSeq - XM_017015982
RefSeq - XM_017015983
RefSeq - XM_017015984
RefSeq - XM_005269656
RefSeq Peptide - NP_001275656
RefSeq Peptide - NP_001275657
RefSeq Peptide - NP_055877
swissprot - Q5VV67
swissprot - X6R7H2
swissprot - E7EVG6
Ensembl - ENSG00000148840
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pprc1ENSDARG00000090337Danio rerio
 si:dkey-93h22.8ENSDARG00000098666Danio rerio
 PPRC1ENSGALG00000020742Gallus gallus
 Pprc1ENSMUSG00000055491Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9UBK2 / PPARGC1A / PPARG coactivator 1 alphaENSG0000010981916
Q86YN6 / PPARGC1B / PPARG coactivator 1 betaENSG0000015584614


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034597  PGC-1-related coactivator
 IPR034605  PGC-1
 IPR034834  PGC-1-related coactivator, RNA recognition motif
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007005 mitochondrion organization TAS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IBA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003712 transcription coregulator activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0030374 nuclear receptor transcription coactivator activity IBA


Pathways (from Reactome)
Pathway description
Transcriptional activation of mitochondrial biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000106459 NRF1 / Q16656 / nuclear respiratory factor 1  / complex / reaction






 

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