ENSGALG00000046164


Gallus gallus

Features
Gene ID: ENSGALG00000046164
  
Biological name :APBB1
  
Synonyms : amyloid beta precursor protein binding family B member 1 / APBB1
  
Possible biological names infered from orthology : Amyloid-beta A4 protein-binding family B member 1 / O00213 / Q9QXJ1
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 194444274
Gene end: 194448722
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000063091
NCBI entrez gene - 100859045     See in Manteia.
RefSeq - XM_015280932
RefSeq - XM_015280933
swissprot - A0A1L1RW81
Ensembl - ENSGALG00000046164
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 apbb1ENSDARG00000076560Danio rerio
 APBB1ENSG00000166313Homo sapiens
 Apbb1ENSMUSG00000037032Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
APBB2 / amyloid beta precursor protein binding family B member 2 / Q92870* / Q9DBR4* / Amyloid-beta A4 protein-binding family B member 2 *ENSGALG0000001426233
Sra1* / APBB3* / O95704* / Q80VJ2* / Q8R1C9* / amyloid beta precursor protein binding family B member 3* / Mus musculus amyloid beta (A4) protein-binding, family B, member 3 (Apbb3), transc...ENSGALG0000000113212


Protein motifs (from Interpro)
Interpro ID Name
 IPR001202  WW domain
 IPR006020  PTB/PI domain
 IPR011993  PH-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0043065 positive regulation of apoptotic process IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0030426 growth cone IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0001540 amyloid-beta binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0042393 histone binding IEA
 molecular_functionGO:0070064 proline-rich region binding IEA


Pathways (from Reactome)
Pathway description
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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