ENSMUSG00000002833


Mus musculus

Features
Gene ID: ENSMUSG00000002833
  
Biological name :Hdgfl2
  
Synonyms : Hdgfl2 / Mus musculus HDGF like 2 (Hdgfl2), transcript variant 4, mRNA. / Q3UMU9
  
Possible biological names infered from orthology : HDGF like 2 / Q7Z4V5
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: D
Gene start: 56079634
Gene end: 56100607
  
Corresponding Affymetrix probe sets: 10446044 (MoGene1.0st)   1416597_at (Mouse Genome 430 2.0 Array)   1438912_at (Mouse Genome 430 2.0 Array)   1438913_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000002911
Ensembl peptide - ENSMUSP00000152948
Ensembl peptide - ENSMUSP00000153249
NCBI entrez gene - 15193     See in Manteia.
MGI - MGI:1194492
RefSeq - XM_006523710
RefSeq - NM_001304784
RefSeq - NM_001304785
RefSeq - NM_001331053
RefSeq - NM_008233
RefSeq - XM_006523707
RefSeq - XM_006523708
RefSeq - XM_006523709
RefSeq Peptide - NP_001291713
RefSeq Peptide - NP_001291714
RefSeq Peptide - NP_001317982
RefSeq Peptide - NP_032259
swissprot - Q3UMU9
Ensembl - ENSMUSG00000002833
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hdgfl2ENSDARG00000019530Danio rerio
 HDGFRP2ENSGALG00000027068Gallus gallus
 HDGFL2ENSG00000167674Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Psip1 / Q99JF8 / Mus musculus PC4 and SFRS1 interacting protein 1 (Psip1), transcript variant 3, mRNA. / O75475* / PC4 and SFRS1 interacting protein 1*ENSMUSG0000002848430
Hdgf / P51859 / Hepatoma-derived growth factor / P51858* / heparin binding growth factor*ENSMUSG0000000489715
Hdgfl3 / Q9JMG7 / Hepatoma-derived growth factor-related protein 3 / Q9Y3E1* / HDGF like 3*ENSMUSG0000002510415
Hdgfl1 / Q5TGJ6* / HDGF like 1*ENSMUSG0000004583510


Protein motifs (from Interpro)
Interpro ID Name
 IPR000313  PWWP domain
 IPR021567  Lens epithelium-derived growth factor, integrase-binding domain
 IPR035441  TFIIS/LEDGF domain superfamily
 IPR035496  HDGF-related, PWWP domain
 IPR036218  HIV integrase-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030307 positive regulation of cell growth ISS
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002968 increased circulating alkaline phosphatase level "elevated activity of this enzyme, which hydrolyzes orthophosphoric monoesters, found in the blood" [RGD:Rat Genome Database submission, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Celsr2tm1Lex/Celsr2tm1Lex
Genetic Background: involves: 129S5/SvEvBrd * C57BL/6J

 MP:0011704 decreased fibroblast proliferation "reduction in the expansion rate of a fibroblast cell population by cell division" [MGI:csmith]
Show

Allelic Composition: Celsr2tm1Lex/Celsr2tm1Lex
Genetic Background: involves: 129S5/SvEvBrd * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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