ENSDARG00000019530


Danio rerio

Features
Gene ID: ENSDARG00000019530
  
Biological name :hdgfl2
  
Synonyms : hdgfl2 / HDGF like 2
  
Possible biological names infered from orthology : Mus musculus HDGF like 2 (Hdgfl2), transcript variant 4, mRNA. / Q3UMU9 / Q7Z4V5
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 22234415
Gene end: 22259175
  
Corresponding Affymetrix probe sets: Dr.3127.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000103259
Ensembl peptide - ENSDARP00000006593
NCBI entrez gene - 80965     See in Manteia.
RefSeq - NM_001002037
RefSeq Peptide - NP_001002037
swissprot - G8JL25
swissprot - F1QIV9
ZFIN ID - ZDB-GENE-040426-2104
Ensembl - ENSDARG00000019530
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HDGFRP2ENSGALG00000027068Gallus gallus
 HDGFL2ENSG00000167674Homo sapiens
 Hdgfl2ENSMUSG00000002833Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
psip1b / PC4 and SFRS1 interacting protein 1b / PSIP1* / O75475* / Q99JF8* / PC4 and SFRS1 interacting protein 1* / Mus musculus PC4 and SFRS1 interacting protein 1 (Psip1), transcript vari...ENSDARG0000007740526
psip1a / PC4 and SFRS1 interacting protein 1a / PSIP1* / O75475* / Q99JF8* / PC4 and SFRS1 interacting protein 1* / Mus musculus PC4 and SFRS1 interacting protein 1 (Psip1), transcript vari...ENSDARG0000010471023


Protein motifs (from Interpro)
Interpro ID Name
 IPR000313  PWWP domain
 IPR021567  Lens epithelium-derived growth factor, integrase-binding domain
 IPR035496  HDGF-related, PWWP domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr