ENSDARG00000077405


Danio rerio

Features
Gene ID: ENSDARG00000077405
  
Biological name :psip1b
  
Synonyms : PC4 and SFRS1 interacting protein 1b / psip1b
  
Possible biological names infered from orthology : Mus musculus PC4 and SFRS1 interacting protein 1 (Psip1), transcript variant 3, mRNA. / O75475 / PC4 and SFRS1 interacting protein 1 / PSIP1 / Q99JF8
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 45200481
Gene end: 45368589
  
Corresponding Affymetrix probe sets: Dr.10645.1.S1_x_at (Zebrafish Array)   Dr.2809.1.A1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000147019
Ensembl peptide - ENSDARP00000153130
Ensembl peptide - ENSDARP00000010777
Ensembl peptide - ENSDARP00000093218
Ensembl peptide - ENSDARP00000098814
Ensembl peptide - ENSDARP00000124540
NCBI entrez gene - 402866     See in Manteia.
RefSeq - XM_021470062
swissprot - E7FA82
swissprot - F1R255
swissprot - F1R415
swissprot - F8W309
ZFIN ID - ZDB-GENE-030131-3273
Ensembl - ENSDARG00000077405
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PSIP1ENSGALG00000015105Gallus gallus
 PSIP1ENSG00000164985Homo sapiens
 Psip1ENSMUSG00000028484Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hdgfl2 / HDGF like 2 / Q7Z4V5*ENSDARG0000001953011
psip1a / PC4 and SFRS1 interacting protein 1a / PSIP1* / O75475* / Q99JF8* / PC4 and SFRS1 interacting protein 1* / Mus musculus PC4 and SFRS1 interacting protein 1 (Psip1), transcript vari...ENSDARG000001047108


Protein motifs (from Interpro)
Interpro ID Name
 IPR000313  PWWP domain
 IPR021567  Lens epithelium-derived growth factor, integrase-binding domain
 IPR035496  HDGF-related, PWWP domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr